This was the second workshop in the series of four planned for the ODIP II project. The aims of the 2nd ODIP II workshop are 1) assessing the progress that has been made with the development of the existing prototype development tasks including expanding these activities to include additional marine data infrastructures and/or to marine domains; and 2) formulation of additional prototype development tasks as described in the Description of Action (DoA) for the project. Location
UCAR (UNIDATA)
South Bay Auditorium located at the Center Green building, CG-1 (see http://www2.ucar.edu/campus/center-green-campus).
Boulder, Colorado
United States
Organisers and Staff
| Organisers | |
|---|---|
| Dr. Athanasia Iona | |
| Ms. Helen Glaves | |
SESSION 8
ESRI presentation, Dawn Wright
ODIP 2 Practices, Jay Pearlman
MODEL WORKFLOWS AND BIG DATA
Update on Streaming Data systems from the Marine Institute, Adam Leadbetter (MI)
Update from Australia, Jonathan Hodge (CSIRO)
NOAA’s Big Data Project, Jeff Weber (UCAR)
OneStop: a Big Data project application, David Fischmann (NOAA)
Discussion and other relevant presentations,
The EVER-EST project, Helen Glaves
SESSION 1: OPENING
Welcome, introductions and logistics
SESSION 9: VOCABULARIES
Plenary, Led by Rob Thomas (BODC)
NVS developments, Rob Thomas
Report on AODN and ANDS vocabulary developments, Jonathan Hodge
Persistent identifiers - Cruise DOIs, Bob Arko
BCO-DMO and Use of PIDs, Cynthia Chandler
DMOMS Overview, Joselyn Elya
Report on RDA VSIG activities, Adam Leadbetter
DOIs for NVS Controlled Vocabularies?, Adam Leadbetter
Discussion, Led by Rob Thomas (BODC)
Breakout sessions
Breakout session reports
Vocabularies
Model workflows & big data
Data citation & publication
Plans for next 8 months, Helen Glaves (Co-ordinator)/Dick Schaap (Technical Coordinator)
Forthcoming dissemination opportunities – discussion, Led by Helen Glaves
Closing remarks, Helen Glaves and Dick Schaap
ODIP-II OVERVIEW
ODIP-II: overview of the project including aims and objectives, Helen Glaves (ODIP II Coordinator)
ODIP-II: technical objectives, Dick Schaap (ODIP II Technical Coordinator)
Discussion
SESSION 2: ODIP PROTOTYPE DEVELOPMENT TASK 1: PLENARY
ODIP 1: current status and future development activities, Led by Dick Schaap (MARIS)
Discussion including other relevant presentations, Led by Dick Schaap
Metadata and Vocabularies at NCEI, Anna Milan (NCEI)
Semantic Data Brokering, Jonathan Hodge (CSIRO)
SESSION 3
Ocean Networks Canada, Reyna Jenkyns (ONC)
ODIP PROTOTYPE DEVELOPMENT TASK 2: PLENARY
ODIP 2: current status and future development activities, Led by Anne Che-Bohnenstengel (BSH)
Discussion including other relevant presentations
SESSION 4: ODIP PROTOTYPE DEVELOPMENT TASK 3: PLENARY
ODIP 3: current status and future development activities, Led by Simon Jirka (52North)
Overview, development of marine SWE profiles, demo of results from the NeXOS Project, Simon Jirka
SWE Workshop at OI2016 as part of Prototype 3, Dick Schaap
Integrating CDI, O&M and SensorML and experience from GeoSeas SeaDataNet and Eurofleets, Paolo Diviacco
Update on the FME custom writer for insertSensor and InsertObservation transactions, Rob van Ede
Sensor Nanny and planned applications in projects like Jerico-Next and Atlantos, Thomas Loubrieu
Practical Approach for SWE Vessel’s Profiles, Alessandro Oggioni, Jordi Sorribas, Raquel Casas, Paolo Tagliolato
Planned 52°North and AWI developments for handling large heterogeneous observation data sets in SWE, Christian Autermann
Discussion including other relevant presentations
SESSION 5: MANAGEMENT OF MARINE BIOLOGY DATA: PLENARY
Introduction to marine biological data management, Led by Ward Appeltans
OBIS-ENV-DATA: a global data sharing facility for sample and sensor-based data holding species occurrence and environmental measurements, Ward Appeltans (UNESCO-IOC/IODE/OBIS)
Microbial Antarctic Resources System (mARS), Nabil Youdjou (RBINS)
WoRMS: the global authoritative list of names of all marine species, Leen Vandepitte (VLIZ)
Marine Regions: a standard list of marine geo-referenced place names and areas serving as a geographic backbone for large-scale integrated biogeographic databases, Simon Claus (VLIZ)
Tools, interfaces and web services - the creation of a the e-infrastructure LIfewatch, supporting marine biological research, Bart Vanhoorne (VLIZ)
Connecting distributed resources using Semantic Web technologies, with an example of linking species data to omics sequence data, Cyndy Chandler (WHOI)
Progress Report on the Global Ecological Marine Units (EMU) Project, Dawn Wright (ESRI)
User needs of data representation in observation and measurements and the possibility of their storage and sharing by means of service oriented services, Alessandro Oggioni (CNR-IREA)
Biological data handling at PANGAEA, the GFBio project, Andree Behnken (PANGAEA)
Discussion including other relevant presentations, Led by Ward Appeltans
SESSION 6: ODIP: NEW DEVELOPMENT ACTIVITIES: PLENARY
Proposed new ODIP prototype developments, Dick Schaap (ODIP II Technical coordinator)
Discussion, Led by Dick Schaap
SESSION 7: DATA PUBLICATION, CITATION AND PERSISTENT IDENTIFIERS
Plenary - Introduction , Led by Thomas Loubrieu
RDA Europe data citation implementation pilot study, Thomas Loubrieu
RDA US data citation implementation pilot study, Cyndy Chandler
H2020 THOR project (http://www.project-thor.eu), Andree Behnken
Cruise DOIs, Bob Arko
EarthCube iSamples Metadata & Identifiers and PHOIBOS Patrol 5, Reyna Jenkyns
Discussion, Led by Thomas Loubrieu
Agenda Documents
| Agenda | Code | Title | |
|---|---|---|---|
| 10.1. | ODIP II - Cross cutting theme - Vocabularies | ||
| 10.1.1. | NVS2 update | ||
| 10.1.3 | Controlled Vocabularies: Update | ||
| 10.1.4. | BCO-DMO and Use of PIDs | ||
| 10.1.5. | Vocabulary Mapping for the Distributed Oceanographic Match-Up Service | ||
| 10.1.7. | DOIs for NVS Controlled Vocabularies? | ||
| 12.1. | Vocabulary breakout notes | ||
| 12.2. | Model workflows & big data | ||
| 12.3. | Data citation & publication | ||
| 13. | ODIP II: next 9 months | ||
| 2.1. | ODIP II: Extending the Ocean Data Interoperability Platform | ||
| 2.2. | ODIP II Technical Aspects | ||
| 3.1. | ODIP Prototype 1 current status and future development activities | ||
| 3.3. | Metadata and Vocabularies at NCEI | ||
| 4.1. | Ocean Networks Canada 101, Interoperability Snapshots, and Potential Collaborations | ||
| 4.2. | ODIP 2 – CSR Current status & future activities | ||
| 5.1. | Current Status and Future Development Activities | ||
| 5.1.1. | Sensor Web Developments in NeXOS | ||
| 5.1.2. | ODIP 3 Prototype project – SWE Workshop at Oceanology International 2016 | ||
| 5.1.3. | Integrating CDI, O&M and SensorML and experience from GeoSeas SeaDataNet and Eurofleets | ||
| 5.1.4. | FME interface for populating SOS & extension of vocabularies for grainsize measurements | ||
| 5.1.5. | Sensor Nanny, Data management services for marine observation operators | ||
| 5.1.6. | Practical Approach for SWE Vessel’s Profiles and Related Metadata Creation (ODIP Prototype 3) | ||
| 5.1.7. | The Challenge of Handling Big Data Sets in the Sensor Web | ||
| 6.1. | ODIP II Biology session | ||
| 6.1.1. | Expanding OBIS beyond species occurrence data, with an extension for environmental data | ||
| 6.1.2. | Microbial Antarctic Resources System (mARS) | ||
| 6.1.3. | World Register of Marine Species | ||
| 6.1.4. | Marine Regions: A standard list of marine georeferenced place names and areas serving as a geographic backbone for large-scale integrated biogeographic databases | ||
| 6.1.5. | Tools, interfaces and webservices – the creation of a the e-infrastructure Lifewatch supporting marine biological research | ||
| 6.1.6. | Leveraging semantic web technologies for marine biology research data | ||
| 6.1.7. | Progress Report: Global Ecological Marine Units (EMUs) | ||
| 6.1.8. | On the opportunity of exploiting Observations & Measurements (O&M) data standard for biotic data management, the possibility of their sharing by means of Service Oriented Services. | ||
| 6.1.9. | Integrated management of biodiversity and paleontology data within GFBio and PANGAEA | ||
| 7.1. | Possible ODIP Prototype development activities | ||
| 8.1. | Data publication, citation and persistent identifiers | ||
| 8.1.1. | A single DOI for the Argo data | ||
| 8.1.2. | Adoption of Data Citation Outcomes by BCO-DMO | ||
| 8.1.3. | THOR: Connecting People, Places, and Things | ||
| 8.1.4. | R2R: Persistent Identifiers for Cruise Expeditions | ||
| 8.1.5. | EarthCube iSamples Metadata & Identifiers and PHOIBOS Patrol 5 | ||
| 9.1. | Esri and ODIP | ||
| 9.2. | ODIP 2 Practices | ||
| 9.3. | Big Data & Model Workflows | ||
| 9.3.1. | Update on streaming data systems at the Marine Institute, Ireland | ||
| 9.3.2. | Update from Australia | ||
| 9.3.3. | NOAA’s Big Data Project | ||
| 9.3.4. | OneStop | ||
| 9.3.5. | ever-est |
Other Documents
| Code | Title | |
|---|---|---|
| Participants Overview |
Participant Stats:
| Staff and organisers | 2 | |
|---|---|---|
| Confirmed | 52 | |
| Not Confirmed | 0 | |
| Not-participating | 0 | |
| Total | 54 |